J3_5IMQ_010
3D structure
- PDB id
- 5IMQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGCC*GGGACUGC*GAGGAAGGAG
- Length
- 22 nucleotides
- Bulged bases
- 5IMQ|1|A|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IMQ|1|A|C|1116
5IMQ|1|A|G|1117
5IMQ|1|A|C|1118
5IMQ|1|A|C|1119
*
5IMQ|1|A|G|1154
5IMQ|1|A|G|1155
5IMQ|1|A|G|1156
5IMQ|1|A|A|1157
5IMQ|1|A|C|1158
5IMQ|1|A|U|1159
5IMQ|1|A|G|1160
5IMQ|1|A|C|1161
*
5IMQ|1|A|G|1175
5IMQ|1|A|A|1176
5IMQ|1|A|G|1177
5IMQ|1|A|G|1178
5IMQ|1|A|A|1179
5IMQ|1|A|A|1180
5IMQ|1|A|G|1181
5IMQ|1|A|G|1182
5IMQ|1|A|A|1183
5IMQ|1|A|G|1184
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S2
- Chain M
- 30S ribosomal protein S9
- Chain R
- 30S ribosomal protein S14 type Z
Coloring options: