J3_5IQR_037
3D structure
- PDB id
- 5IQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to the 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUAG*CAG*CGUGUCCUUGGUUCGAUUCCGAGUC
- Length
- 33 nucleotides
- Bulged bases
- 5IQR|1|4|U|8, 5IQR|1|4|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IQR|1|4|G|6
5IQR|1|4|A|7
5IQR|1|4|U|8
5IQR|1|4|A|9
5IQR|1|4|G|10
*
5IQR|1|4|C|25
5IQR|1|4|A|26
5IQR|1|4|G|27
*
5IQR|1|4|C|43
5IQR|1|4|G|44
5IQR|1|4|U|45
5IQR|1|4|G|46
5IQR|1|4|U|47
5IQR|1|4|C|48
5IQR|1|4|C|49
5IQR|1|4|U|50
5IQR|1|4|U|51
5IQR|1|4|G|52
5IQR|1|4|G|53
5IQR|1|4|U|54
5IQR|1|4|U|55
5IQR|1|4|C|56
5IQR|1|4|G|57
5IQR|1|4|A|58
5IQR|1|4|U|59
5IQR|1|4|U|60
5IQR|1|4|C|61
5IQR|1|4|C|62
5IQR|1|4|G|63
5IQR|1|4|A|64
5IQR|1|4|G|65
5IQR|1|4|U|66
5IQR|1|4|C|67
Current chains
- Chain 4
- E-site tRNA(Phe)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain c
- 50S ribosomal protein L33
- Chain l
- 30S ribosomal protein S7
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