J3_5J7L_006
3D structure
- PDB id
- 5J7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 5J7L|1|AA|A|975, 5J7L|1|AA|G|976, 5J7L|1|AA|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.3
- Basepair signature
- cWW-F-F-F-tWW-F-tSH-tSS-cSS-F-F-F-F-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5J7L|1|AA|U|955
5J7L|1|AA|U|956
5J7L|1|AA|U|957
5J7L|1|AA|A|958
5J7L|1|AA|A|959
5J7L|1|AA|U|960
5J7L|1|AA|U|961
5J7L|1|AA|C|962
*
5J7L|1|AA|G|973
5J7L|1|AA|A|974
5J7L|1|AA|A|975
5J7L|1|AA|G|976
5J7L|1|AA|A|977
5J7L|1|AA|A|978
5J7L|1|AA|C|979
5J7L|1|AA|C|980
5J7L|1|AA|U|981
5J7L|1|AA|U|982
5J7L|1|AA|A|983
5J7L|1|AA|C|984
*
5J7L|1|AA|G|1221
5J7L|1|AA|G|1222
5J7L|1|AA|C|1223
5J7L|1|AA|U|1224
5J7L|1|AA|A|1225
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AJ
- 30S ribosomal protein S10
- Chain AM
- 30S ribosomal protein S13
- Chain AN
- 30S ribosomal protein S14
- Chain AS
- 30S ribosomal protein S19
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