J3_5J88_057
3D structure
- PDB id
- 5J88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.32 Å
Loop
- Sequence
- UAGAAU*GGAAUACCGGUGG*CGG
- Length
- 22 nucleotides
- Bulged bases
- 5J88|1|BA|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5J88|1|BA|U|672
5J88|1|BA|A|673
5J88|1|BA|G|674
5J88|1|BA|A|675
5J88|1|BA|A|676
5J88|1|BA|U|677
*
5J88|1|BA|G|713
5J88|1|BA|G|714
5J88|1|BA|A|715
5J88|1|BA|A|716
5J88|1|BA|U|717
5J88|1|BA|A|718
5J88|1|BA|C|719
5J88|1|BA|C|720
5J88|1|BA|G|721
5J88|1|BA|G|722
5J88|1|BA|U|723
5J88|1|BA|G|724
5J88|1|BA|G|725
*
5J88|1|BA|C|732
5J88|1|BA|G|733
5J88|1|BA|G|734
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BF
- 30S ribosomal protein S6
- Chain BK
- 30S ribosomal protein S11
- Chain BO
- 30S ribosomal protein S15
- Chain BR
- 30S ribosomal protein S18
- Chain BU
- 30S ribosomal protein S21
- Chain CC
- 50S ribosomal protein L2
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