J3_5J91_045

3D structure

PDB id

5J91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Wild-type 70S E coli ribosome bound to Tigecycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GAAGGAACUAGG*CUG*CC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J91|1|DA|G|1663
5J91|1|DA|A|1664
5J91|1|DA|A|1665
5J91|1|DA|G|1666
5J91|1|DA|G|1667
5J91|1|DA|A|1668
5J91|1|DA|A|1669
5J91|1|DA|C|1670
5J91|1|DA|U|1671
5J91|1|DA|A|1672
5J91|1|DA|G|1673
5J91|1|DA|G|1674
*
5J91|1|DA|C|1990
5J91|1|DA|U|1991
5J91|1|DA|G|1992
*
5J91|1|DA|C|1996
5J91|1|DA|C|1997

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DD

50S ribosomal protein L3

Chain DL

50S ribosomal protein L14

Chain DQ

50S ribosomal protein L19