J3_5JU8_035

3D structure

PDB id

5JU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGAUGUUG*CAUCAUUUAAAGAAA*UCAC

Length

27 nucleotides

Bulged bases

5JU8|1|BA|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5JU8|1|BA|G|1055
5JU8|1|BA|G|1056
5JU8|1|BA|A|1057
5JU8|1|BA|U|1058
5JU8|1|BA|G|1059
5JU8|1|BA|U|1060
5JU8|1|BA|U|1061
5JU8|1|BA|G|1062
*
5JU8|1|BA|C|1076
5JU8|1|BA|A|1077
5JU8|1|BA|U|1078
5JU8|1|BA|C|1079
5JU8|1|BA|A|1080
5JU8|1|BA|U|1081
5JU8|1|BA|U|1082
5JU8|1|BA|U|1083
5JU8|1|BA|A|1084
5JU8|1|BA|A|1085
5JU8|1|BA|A|1086
5JU8|1|BA|G|1087
5JU8|1|BA|A|1088
5JU8|1|BA|A|1089
5JU8|1|BA|A|1090
*
5JU8|1|BA|U|1101
5JU8|1|BA|C|1102
5JU8|1|BA|A|1103
5JU8|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BI

50S ribosomal protein L11