J3_5KPW_022

3D structure

PDB id

5KPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

5KPW|1|27|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5KPW|1|27|C|2295
5KPW|1|27|U|2296
5KPW|1|27|A|2297
5KPW|1|27|A|2298
5KPW|1|27|U|2299
*
5KPW|1|27|A|2317
5KPW|1|27|G|2318
5KPW|1|27|G|2319
5KPW|1|27|U|2320
5KPW|1|27|U|2321
5KPW|1|27|A|2322
5KPW|1|27|G|2323
*
5KPW|1|27|C|2332
5KPW|1|27|A|2333
5KPW|1|27|U|2334
5KPW|1|27|A|2335
5KPW|1|27|A|2336
5KPW|1|27|G|2337

Current chains

Chain 27

23S ribosomal RNA

Nearby chains

Chain 28

5S ribosomal RNA; 5S rRNA

Chain 31

Transfer RNA; tRNA

Chain D

50S ribosomal protein L5

Chain N

50S ribosomal protein L18

Chain V

50S ribosomal protein L27