3D structure

PDB id
5KPX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GUG*UGUUG*CGCAAC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5KPX|1|26|G|1072
5KPX|1|26|U|1073
5KPX|1|26|G|1074
*
5KPX|1|26|U|1083
5KPX|1|26|G|1084
5KPX|1|26|U|1085
5KPX|1|26|U|1086
5KPX|1|26|G|1087
*
5KPX|1|26|C|1098
5KPX|1|26|G|1099
5KPX|1|26|C|1100
5KPX|1|26|A|1101
5KPX|1|26|A|1102
5KPX|1|26|C|1103

Current chains

Chain 26
16S ribosomal RNA

Nearby chains

Chain 25
30S ribosomal protein S21
Chain 6
30S ribosomal protein S2
Chain 7
30S ribosomal protein S3
Chain 9
30S ribosomal protein S5

Coloring options:

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