J3_5LI0_032

3D structure

PDB id

5LI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CC*GUUAAUA*UAAUCG

Length

15 nucleotides

Bulged bases

5LI0|1|A|U|2853

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LI0|1|A|C|2834
5LI0|1|A|C|2835
*
5LI0|1|A|G|2851
5LI0|1|A|U|2852
5LI0|1|A|U|2853
5LI0|1|A|A|2854
5LI0|1|A|A|2855
5LI0|1|A|U|2856
5LI0|1|A|A|2857
*
5LI0|1|A|U|2901
5LI0|1|A|A|2902
5LI0|1|A|A|2903
5LI0|1|A|U|2904
5LI0|1|A|C|2905
5LI0|1|A|G|2906

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L32

Chain E

50S ribosomal protein L3

Chain Q

50S ribosomal protein L17