J3_5LI0_036
3D structure
- PDB id
- 5LI0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGG*CUUGAGUGC*GUAACUGACG
- Length
- 22 nucleotides
- Bulged bases
- 5LI0|1|a|U|661, 5LI0|1|a|U|759
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LI0|1|a|C|594
5LI0|1|a|G|595
5LI0|1|a|G|596
*
5LI0|1|a|C|659
5LI0|1|a|U|660
5LI0|1|a|U|661
5LI0|1|a|G|662
5LI0|1|a|A|663
5LI0|1|a|G|664
5LI0|1|a|U|665
5LI0|1|a|G|666
5LI0|1|a|C|667
*
5LI0|1|a|G|754
5LI0|1|a|U|755
5LI0|1|a|A|756
5LI0|1|a|A|757
5LI0|1|a|C|758
5LI0|1|a|U|759
5LI0|1|a|G|760
5LI0|1|a|A|761
5LI0|1|a|C|762
5LI0|1|a|G|763
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S8
- Chain l
- 30S ribosomal protein S12
- Chain o
- 30S ribosomal protein S15
- Chain q
- 30S ribosomal protein S17
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