J3_5LI0_037
3D structure
- PDB id
- 5LI0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUUUAAUUCG*CGAAGAACCUUAC*GGCUAC
- Length
- 29 nucleotides
- Bulged bases
- 5LI0|1|a|A|985, 5LI0|1|a|G|986, 5LI0|1|a|A|988
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LI0|1|a|G|964
5LI0|1|a|U|965
5LI0|1|a|U|966
5LI0|1|a|U|967
5LI0|1|a|A|968
5LI0|1|a|A|969
5LI0|1|a|U|970
5LI0|1|a|U|971
5LI0|1|a|C|972
5LI0|1|a|G|973
*
5LI0|1|a|C|982
5LI0|1|a|G|983
5LI0|1|a|A|984
5LI0|1|a|A|985
5LI0|1|a|G|986
5LI0|1|a|A|987
5LI0|1|a|A|988
5LI0|1|a|C|989
5LI0|1|a|C|990
5LI0|1|a|U|991
5LI0|1|a|U|992
5LI0|1|a|A|993
5LI0|1|a|C|994
*
5LI0|1|a|G|1232
5LI0|1|a|G|1233
5LI0|1|a|C|1234
5LI0|1|a|U|1235
5LI0|1|a|A|1236
5LI0|1|a|C|1237
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14 type Z
- Chain s
- 30S ribosomal protein S19
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