J3_5LL6_005

3D structure

PDB id

5LL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUA*UUACG*CAAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LL6|1|2|C|1037
5LL6|1|2|U|1038
5LL6|1|2|A|1039
*
5LL6|1|2|U|1079
5LL6|1|2|U|1080
5LL6|1|2|A|1081
5LL6|1|2|C|1082
5LL6|1|2|G|1083
*
5LL6|1|2|C|1090
5LL6|1|2|A|1091
5LL6|1|2|A|1092
5LL6|1|2|A|1093
5LL6|1|2|G|1094

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain P

40S ribosomal protein S0-A

Chain a

40S ribosomal protein S21-A

Chain b

40S ribosomal protein S22-A

Chain e

40S ribosomal protein S26-A

Chain f

40S ribosomal protein S27-A