J3_5LMN_016

3D structure

PDB id

5LMN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GGGAACC*GGGUGC*GAGCCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMN|1|A|G|1001|||A
5LMN|1|A|G|1002
5LMN|1|A|G|1003
5LMN|1|A|A|1004
5LMN|1|A|A|1005
5LMN|1|A|C|1006
5LMN|1|A|C|1007
*
5LMN|1|A|G|1022
5LMN|1|A|G|1023
5LMN|1|A|G|1024
5LMN|1|A|U|1025
5LMN|1|A|G|1026
5LMN|1|A|C|1027
*
5LMN|1|A|G|1034
5LMN|1|A|A|1035
5LMN|1|A|G|1036
5LMN|1|A|C|1037
5LMN|1|A|C|1038
5LMN|1|A|C|1039

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain C

30S ribosomal protein S3