J3_5LMO_005
3D structure
- PDB id
- 5LMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CAAGC*GCUAGUAA*UGAAUACG
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LMO|1|A|C|936
5LMO|1|A|A|937
5LMO|1|A|A|938
5LMO|1|A|G|939
5LMO|1|A|C|940
*
5LMO|1|A|G|1343
5LMO|1|A|C|1344
5LMO|1|A|U|1345
5LMO|1|A|A|1346
5LMO|1|A|G|1347
5LMO|1|A|U|1348
5LMO|1|A|A|1349
5LMO|1|A|A|1350
*
5LMO|1|A|U|1372
5LMO|1|A|G|1373
5LMO|1|A|A|1374
5LMO|1|A|A|1375
5LMO|1|A|U|1376
5LMO|1|A|A|1377
5LMO|1|A|C|1378
5LMO|1|A|G|1379
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
Coloring options: