J3_5LMR_009

3D structure

PDB id

5LMR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2B)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.45 Å

Loop

Sequence

GGGAAC*GGUGC*GAGCCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMR|1|A|G|1001|||A
5LMR|1|A|G|1002
5LMR|1|A|G|1003
5LMR|1|A|A|1004
5LMR|1|A|A|1005
5LMR|1|A|C|1006
*
5LMR|1|A|G|1023
5LMR|1|A|G|1024
5LMR|1|A|U|1025
5LMR|1|A|G|1026
5LMR|1|A|C|1027
*
5LMR|1|A|G|1034
5LMR|1|A|A|1035
5LMR|1|A|G|1036
5LMR|1|A|C|1037
5LMR|1|A|C|1038
5LMR|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains