J3_5LMT_018

3D structure

PDB id

5LMT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.15 Å

Loop

Sequence

GGGAACC*GGGUGC*GAGCCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMT|1|A|G|1001|||A
5LMT|1|A|G|1002
5LMT|1|A|G|1003
5LMT|1|A|A|1004
5LMT|1|A|A|1005
5LMT|1|A|C|1006
5LMT|1|A|C|1007
*
5LMT|1|A|G|1022
5LMT|1|A|G|1023
5LMT|1|A|G|1024
5LMT|1|A|U|1025
5LMT|1|A|G|1026
5LMT|1|A|C|1027
*
5LMT|1|A|G|1034
5LMT|1|A|A|1035
5LMT|1|A|G|1036
5LMT|1|A|C|1037
5LMT|1|A|C|1038
5LMT|1|A|C|1039

Current chains

Chain A

16S ribosomal RNA

Nearby chains