J3_5LMU_001

3D structure

PDB id

5LMU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GC*GGAAUCU*AGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMU|1|A|G|46
5LMU|1|A|C|47
*
5LMU|1|A|G|361
5LMU|1|A|G|362
5LMU|1|A|A|363
5LMU|1|A|A|364
5LMU|1|A|U|365
5LMU|1|A|C|366
5LMU|1|A|U|367
*
5LMU|1|A|A|393
5LMU|1|A|G|394
5LMU|1|A|C|395

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S12

Chain P

30S ribosomal protein S16