J3_5LMU_017

3D structure

PDB id

5LMU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of bacterial 30S-IF3-mRNA-tRNA translation pre-initiation complex, closed form (state-4)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGGAACC*GGGUGC*GAGCCC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LMU|1|A|G|1001|||A
5LMU|1|A|G|1002
5LMU|1|A|G|1003
5LMU|1|A|A|1004
5LMU|1|A|A|1005
5LMU|1|A|C|1006
5LMU|1|A|C|1007
*
5LMU|1|A|G|1022
5LMU|1|A|G|1023
5LMU|1|A|G|1024
5LMU|1|A|U|1025
5LMU|1|A|G|1026
5LMU|1|A|C|1027
*
5LMU|1|A|G|1034
5LMU|1|A|A|1035
5LMU|1|A|G|1036
5LMU|1|A|C|1037
5LMU|1|A|C|1038
5LMU|1|A|C|1039

Current chains

Chain A

16S ribosomal RNA

Nearby chains