J3_5LZC_035

3D structure

PDB id

5LZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.8 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZC|1|a|G|1003
5LZC|1|a|A|1004
5LZC|1|a|A|1005
5LZC|1|a|G|1006
*
5LZC|1|a|U|1023
5LZC|1|a|G|1024
5LZC|1|a|U|1025
5LZC|1|a|G|1026
5LZC|1|a|C|1027
5LZC|1|a|C|1028
*
5LZC|1|a|G|1033
5LZC|1|a|G|1034
5LZC|1|a|A|1035
5LZC|1|a|A|1036
5LZC|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14