J3_5LZS_007

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|5|G|1969
5LZS|1|5|A|1970
5LZS|1|5|U|1971
5LZS|1|5|G|1972
*
5LZS|1|5|C|1994
5LZS|1|5|G|1995
5LZS|1|5|C|1996
5LZS|1|5|U|1997
5LZS|1|5|A|1998
5LZS|1|5|A|1999
5LZS|1|5|G|2000
5LZS|1|5|G|2001
*
5LZS|1|5|C|2016
5LZS|1|5|A|2017
5LZS|1|5|C|2018

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain s

uL10

Chain t

uL11