J3_5LZS_013

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CGG*CUGAC*GGACAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|5|C|3937
5LZS|1|5|G|3938
5LZS|1|5|G|3939
*
5LZS|1|5|C|4074
5LZS|1|5|U|4075
5LZS|1|5|G|4076
5LZS|1|5|A|4077
5LZS|1|5|C|4078
*
5LZS|1|5|G|4168
5LZS|1|5|G|4169
5LZS|1|5|A|4170
5LZS|1|5|C|4171
5LZS|1|5|A|4172
5LZS|1|5|G|4173

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain G

eL8

Chain N

Ribosomal protein L15