J3_5LZS_017

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CAU*GCUUCUG*CAAGG

Length

15 nucleotides

Bulged bases

5LZS|1|5|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|5|C|4970
5LZS|1|5|A|4971
5LZS|1|5|U|4972
*
5LZS|1|5|G|4986
5LZS|1|5|C|4987
5LZS|1|5|U|4988
5LZS|1|5|U|4989
5LZS|1|5|C|4990
5LZS|1|5|U|4991
5LZS|1|5|G|4992
*
5LZS|1|5|C|5059
5LZS|1|5|A|5060
5LZS|1|5|A|5061
5LZS|1|5|G|5062
5LZS|1|5|G|5063

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain P

uL22

Chain d

eL31