J3_5LZS_038
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGAU
- Length
- 26 nucleotides
- Bulged bases
- 5LZS|1|5|C|2470, 5LZS|1|5|A|2472, 5LZS|1|5|G|2475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZS|1|5|A|2451
5LZS|1|5|G|2452
5LZS|1|5|A|2453
5LZS|1|5|U|2454
5LZS|1|5|G|2455
5LZS|1|5|G|2456
*
5LZS|1|5|C|2465
5LZS|1|5|G|2466
5LZS|1|5|U|2467
5LZS|1|5|U|2468
5LZS|1|5|C|2469
5LZS|1|5|C|2470
5LZS|1|5|G|2471
5LZS|1|5|A|2472
5LZS|1|5|A|2473
5LZS|1|5|G|2474
5LZS|1|5|G|2475
5LZS|1|5|G|2476
*
5LZS|1|5|C|2501
5LZS|1|5|A|2502
5LZS|1|5|G|2503
5LZS|1|5|C|2504
5LZS|1|5|C|2505
5LZS|1|5|G|2506
5LZS|1|5|A|2507
5LZS|1|5|U|2508
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain A
- uL2
- Chain G
- eL8
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
- Chain j
- Ribosomal protein L37
Coloring options: