J3_5LZT_006

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|5|G|1969
5LZT|1|5|A|1970
5LZT|1|5|U|1971
5LZT|1|5|G|1972
*
5LZT|1|5|C|1994
5LZT|1|5|G|1995
5LZT|1|5|C|1996
5LZT|1|5|U|1997
5LZT|1|5|A|1998
5LZT|1|5|A|1999
5LZT|1|5|G|2000
5LZT|1|5|G|2001
*
5LZT|1|5|C|2016
5LZT|1|5|A|2017
5LZT|1|5|C|2018

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain s

uL10

Chain t

uL11