3D structure

PDB id
5LZT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
CUG*UUCCG*CAAAG
Length
13 nucleotides
Bulged bases
5LZT|1|9|C|1138
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZT|1|9|C|1094
5LZT|1|9|U|1095
5LZT|1|9|G|1096
*
5LZT|1|9|U|1136
5LZT|1|9|U|1137
5LZT|1|9|C|1138
5LZT|1|9|C|1139
5LZT|1|9|G|1140
*
5LZT|1|9|C|1147
5LZT|1|9|A|1148
5LZT|1|9|A|1149
5LZT|1|9|A|1150
5LZT|1|9|G|1151

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain AA
uS2
Chain VV
eS21
Chain WW
uS8
Chain aa
eS26
Chain bb
eS27

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2449 s