3D structure

PDB id
5LZT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.65 Å

Loop

Sequence
CUGGC*GGACAAG*CCCGAGAUUG
Length
22 nucleotides
Bulged bases
5LZT|1|9|U|1477
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZT|1|9|C|1391
5LZT|1|9|U|1392
5LZT|1|9|G|1393
5LZT|1|9|G|1394
5LZT|1|9|C|1395
*
5LZT|1|9|G|1450
5LZT|1|9|G|1451
5LZT|1|9|A|1452
5LZT|1|9|C|1453
5LZT|1|9|A|1454
5LZT|1|9|A|1455
5LZT|1|9|G|1456
*
5LZT|1|9|C|1470
5LZT|1|9|C|1471
5LZT|1|9|C|1472
5LZT|1|9|G|1473
5LZT|1|9|A|1474
5LZT|1|9|G|1475
5LZT|1|9|A|1476
5LZT|1|9|U|1477
5LZT|1|9|U|1478
5LZT|1|9|G|1479

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain DD
uS3
Chain FF
uS7
Chain QQ
uS9
Chain RR
eS17
Chain UU
uS10
Chain cc
eS28
Chain dd
uS14
Chain gg
RACK1

Coloring options:

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