J3_5LZT_032

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

5LZT|1|5|C|216, 5LZT|1|5|C|217, 5LZT|1|5|A|218, 5LZT|1|5|G|219, 5LZT|1|5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|5|C|196
5LZT|1|5|A|197
5LZT|1|5|A|198
5LZT|1|5|G|199
*
5LZT|1|5|C|215
5LZT|1|5|C|216
5LZT|1|5|C|217
5LZT|1|5|A|218
5LZT|1|5|G|219
5LZT|1|5|C|220
5LZT|1|5|C|221
5LZT|1|5|C|222
5LZT|1|5|G|223
5LZT|1|5|U|224
5LZT|1|5|G|225
5LZT|1|5|G|226
5LZT|1|5|A|227
5LZT|1|5|C|228
*
5LZT|1|5|G|240
5LZT|1|5|G|241
5LZT|1|5|U|242
5LZT|1|5|A|243
5LZT|1|5|G|244

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain Y

uL24