J3_5LZT_035

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

5LZT|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|5|C|451
5LZT|1|5|A|452
5LZT|1|5|G|453
5LZT|1|5|U|454
5LZT|1|5|C|455
*
5LZT|1|5|G|701
5LZT|1|5|U|702
5LZT|1|5|G|703
5LZT|1|5|C|704
5LZT|1|5|G|705
*
5LZT|1|5|C|1292
5LZT|1|5|G|1293
5LZT|1|5|A|1294
5LZT|1|5|U|1295
5LZT|1|5|G|1296

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

eL6

Chain e

eL32

Chain f

eL33

Chain r

eL28