J3_5LZT_046

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

5LZT|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|5|A|2551
5LZT|1|5|G|2552
5LZT|1|5|A|2553
5LZT|1|5|U|2554
5LZT|1|5|G|2555
*
5LZT|1|5|C|2572
5LZT|1|5|A|2573
5LZT|1|5|G|2574
5LZT|1|5|U|2575
*
5LZT|1|5|A|2757
5LZT|1|5|G|2758
5LZT|1|5|G|2759
5LZT|1|5|G|2760
5LZT|1|5|U|2761
5LZT|1|5|G|2762
5LZT|1|5|U|2763
5LZT|1|5|A|2764
5LZT|1|5|A|2765
5LZT|1|5|A|2766
5LZT|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

eL27