J3_5LZU_001

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

5LZU|1|5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZU|1|5|C|112
5LZU|1|5|A|113
5LZU|1|5|G|114
5LZU|1|5|C|115
5LZU|1|5|G|116
*
5LZU|1|5|C|155
5LZU|1|5|G|156
5LZU|1|5|U|157
5LZU|1|5|A|158
5LZU|1|5|C|159
5LZU|1|5|G|160
*
5LZU|1|5|C|275
5LZU|1|5|C|276
5LZU|1|5|G|277
5LZU|1|5|G|278

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain G

eL8

Chain L

eL13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36