J3_5LZU_003

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UCC*GCCG*CGCGUCCCCCGCG

Length

20 nucleotides

Bulged bases

5LZU|1|5|C|1252, 5LZU|1|5|G|1271, 5LZU|1|5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZU|1|5|U|982
5LZU|1|5|C|983
5LZU|1|5|C|984
*
5LZU|1|5|G|1070
5LZU|1|5|C|1071
5LZU|1|5|C|1072
5LZU|1|5|G|1073
*
5LZU|1|5|C|1239
5LZU|1|5|G|1244
5LZU|1|5|C|1245
5LZU|1|5|G|1246
5LZU|1|5|U|1247
5LZU|1|5|C|1248
5LZU|1|5|C|1249
5LZU|1|5|C|1250
5LZU|1|5|C|1251
5LZU|1|5|C|1252
5LZU|1|5|G|1271
5LZU|1|5|C|1272
5LZU|1|5|G|1273

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain F

uL30

Chain b

eL29