J3_5LZU_024

3D structure

PDB id

5LZU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

5LZU|1|9|C|1138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZU|1|9|C|1094
5LZU|1|9|U|1095
5LZU|1|9|G|1096
*
5LZU|1|9|U|1136
5LZU|1|9|U|1137
5LZU|1|9|C|1138
5LZU|1|9|C|1139
5LZU|1|9|G|1140
*
5LZU|1|9|C|1147
5LZU|1|9|A|1148
5LZU|1|9|A|1149
5LZU|1|9|A|1150
5LZU|1|9|G|1151

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain AA

uS2

Chain VV

eS21

Chain WW

uS8

Chain aa

eS26

Chain bb

40S ribosomal protein S27