J3_5LZU_029
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_5LZU_029 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.3682
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_99563.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
5LZU|1|9|U|1340
5LZU|1|9|C|1341
5LZU|1|9|U|1342
5LZU|1|9|U|1343
5LZU|1|9|A|1344
5LZU|1|9|G|1345
*
5LZU|1|9|C|1384
5LZU|1|9|G|1385
5LZU|1|9|A|1386
5LZU|1|9|G|1387
5LZU|1|9|A|1388
5LZU|1|9|C|1389
*
5LZU|1|9|G|1481
5LZU|1|9|C|1482
5LZU|1|9|A|1483
5LZU|1|9|A|1484
5LZU|1|9|U|1485
5LZU|1|9|A|1486
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain CC
- uS5
- Chain DD
- uS3
- Chain QQ
- uS9
- Chain RR
- eS17
- Chain UU
- uS10
- Chain dd
- uS14
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