3D structure

PDB id
5LZU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mammalian ribosomal termination complex with accommodated eRF1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.75 Å

Loop

Sequence
UGGA*UUAAGAG*CAUUA
Length
16 nucleotides
Bulged bases
5LZU|1|9|G|921
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LZU|1|9|U|682
5LZU|1|9|G|683
5LZU|1|9|G|684
5LZU|1|9|A|685
*
5LZU|1|9|U|917
5LZU|1|9|U|918
5LZU|1|9|A|919
5LZU|1|9|A|920
5LZU|1|9|G|921
5LZU|1|9|A|922
5LZU|1|9|G|923
*
5LZU|1|9|C|1019
5LZU|1|9|A|1020
5LZU|1|9|U|1021
5LZU|1|9|U|1022
5LZU|1|9|A|1023

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain HH
eS7
Chain LL
uS17
Chain NN
uS15
Chain WW
uS8
Chain XX
uS12
Chain bb
40S ribosomal protein S27

Coloring options:

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