J3_5LZV_003

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

UCC*GCCGG*CCACGCGUCCCCCGCG

Length

24 nucleotides

Bulged bases

5LZV|1|5|C|1237, 5LZV|1|5|G|1271, 5LZV|1|5|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|U|982
5LZV|1|5|C|983
5LZV|1|5|C|984
*
5LZV|1|5|G|1070
5LZV|1|5|C|1071
5LZV|1|5|C|1072
5LZV|1|5|G|1073
5LZV|1|5|G|1074
*
5LZV|1|5|C|1236
5LZV|1|5|C|1237
5LZV|1|5|A|1238
5LZV|1|5|C|1239
5LZV|1|5|G|1244
5LZV|1|5|C|1245
5LZV|1|5|G|1246
5LZV|1|5|U|1247
5LZV|1|5|C|1248
5LZV|1|5|C|1249
5LZV|1|5|C|1250
5LZV|1|5|C|1251
5LZV|1|5|C|1252
5LZV|1|5|G|1271
5LZV|1|5|C|1272
5LZV|1|5|G|1273

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain C

uL4

Chain E

eL6

Chain F

uL30

Chain b

eL29