J3_5LZV_011

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

AGAUGG*CCAGU*AGGGUGUAAAU

Length

22 nucleotides

Bulged bases

5LZV|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|A|2551
5LZV|1|5|G|2552
5LZV|1|5|A|2553
5LZV|1|5|U|2554
5LZV|1|5|G|2555
5LZV|1|5|G|2556
*
5LZV|1|5|C|2571
5LZV|1|5|C|2572
5LZV|1|5|A|2573
5LZV|1|5|G|2574
5LZV|1|5|U|2575
*
5LZV|1|5|A|2757
5LZV|1|5|G|2758
5LZV|1|5|G|2759
5LZV|1|5|G|2760
5LZV|1|5|U|2761
5LZV|1|5|G|2762
5LZV|1|5|U|2763
5LZV|1|5|A|2764
5LZV|1|5|A|2765
5LZV|1|5|A|2766
5LZV|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

eL27