J3_5LZV_041
3D structure
- PDB id
- 5LZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- CGGUUG*CCUUC*GCACCGCACGUUCGUG
- Length
- 27 nucleotides
- Bulged bases
- 5LZV|1|5|U|4882, 5LZV|1|5|A|4938, 5LZV|1|5|C|4940, 5LZV|1|5|A|4943, 5LZV|1|5|C|4944, 5LZV|1|5|U|4950
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZV|1|5|C|4749
5LZV|1|5|G|4750
5LZV|1|5|G|4751
5LZV|1|5|U|4752
5LZV|1|5|U|4753
5LZV|1|5|G|4754
*
5LZV|1|5|C|4879
5LZV|1|5|C|4880
5LZV|1|5|U|4881
5LZV|1|5|U|4882
5LZV|1|5|C|4883
*
5LZV|1|5|G|4936
5LZV|1|5|C|4937
5LZV|1|5|A|4938
5LZV|1|5|C|4939
5LZV|1|5|C|4940
5LZV|1|5|G|4941
5LZV|1|5|C|4942
5LZV|1|5|A|4943
5LZV|1|5|C|4944
5LZV|1|5|G|4945
5LZV|1|5|U|4946
5LZV|1|5|U|4947
5LZV|1|5|C|4948
5LZV|1|5|G|4949
5LZV|1|5|U|4950
5LZV|1|5|G|4951
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- eL6
- Chain M
- eL14
- Chain O
- uL13
- Chain f
- eL33
Coloring options: