J3_5LZW_011

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

AGAUGG*CCAGU*AGGGUGUAAAU

Length

22 nucleotides

Bulged bases

5LZW|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|A|2551
5LZW|1|5|G|2552
5LZW|1|5|A|2553
5LZW|1|5|U|2554
5LZW|1|5|G|2555
5LZW|1|5|G|2556
*
5LZW|1|5|C|2571
5LZW|1|5|C|2572
5LZW|1|5|A|2573
5LZW|1|5|G|2574
5LZW|1|5|U|2575
*
5LZW|1|5|A|2757
5LZW|1|5|G|2758
5LZW|1|5|G|2759
5LZW|1|5|G|2760
5LZW|1|5|U|2761
5LZW|1|5|G|2762
5LZW|1|5|U|2763
5LZW|1|5|A|2764
5LZW|1|5|A|2765
5LZW|1|5|A|2766
5LZW|1|5|U|2767

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain Z

eL27