J3_5LZW_022

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

UGGA*UUAAGA*UA

Length

12 nucleotides

Bulged bases

5LZW|1|9|G|921

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|9|U|682
5LZW|1|9|G|683
5LZW|1|9|G|684
5LZW|1|9|A|685
*
5LZW|1|9|U|917
5LZW|1|9|U|918
5LZW|1|9|A|919
5LZW|1|9|A|920
5LZW|1|9|G|921
5LZW|1|9|A|922
*
5LZW|1|9|U|1022
5LZW|1|9|A|1023

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain HH

eS7

Chain LL

uS17

Chain NN

uS15

Chain WW

uS8

Chain XX

uS12

Chain bb

eS27