J3_5LZW_047

3D structure

PDB id

5LZW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

5LZW|1|5|U|4989, 5LZW|1|5|C|4990

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZW|1|5|C|4970
5LZW|1|5|A|4971
5LZW|1|5|U|4972
*
5LZW|1|5|G|4986
5LZW|1|5|C|4987
5LZW|1|5|U|4988
5LZW|1|5|U|4989
5LZW|1|5|C|4990
5LZW|1|5|U|4991
*
5LZW|1|5|A|5060
5LZW|1|5|A|5061
5LZW|1|5|G|5062
5LZW|1|5|G|5063

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain B

uL3

Chain P

uL22

Chain d

eL31