J3_5LZX_024

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

5LZX|1|9|C|1138

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|9|C|1094
5LZX|1|9|U|1095
5LZX|1|9|G|1096
*
5LZX|1|9|U|1136
5LZX|1|9|U|1137
5LZX|1|9|C|1138
5LZX|1|9|C|1139
5LZX|1|9|G|1140
*
5LZX|1|9|C|1147
5LZX|1|9|A|1148
5LZX|1|9|A|1149
5LZX|1|9|A|1150
5LZX|1|9|G|1151

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain AA

uS2

Chain VV

eS21

Chain WW

uS8

Chain aa

eS26

Chain bb

40S ribosomal protein S27