J3_5LZX_036

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CAGUC*GUGCG*CGAUG

Length

15 nucleotides

Bulged bases

5LZX|1|5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|C|451
5LZX|1|5|A|452
5LZX|1|5|G|453
5LZX|1|5|U|454
5LZX|1|5|C|455
*
5LZX|1|5|G|701
5LZX|1|5|U|702
5LZX|1|5|G|703
5LZX|1|5|C|704
5LZX|1|5|G|705
*
5LZX|1|5|C|1292
5LZX|1|5|G|1293
5LZX|1|5|A|1294
5LZX|1|5|U|1295
5LZX|1|5|G|1296

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain e

eL32

Chain f

eL33

Chain r

eL28