J3_5LZX_041
3D structure
- PDB id
- 5LZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- CGGUUG*CCUUC*GCACCGCACGUUCGUG
- Length
- 27 nucleotides
- Bulged bases
- 5LZX|1|5|U|4882, 5LZX|1|5|A|4938, 5LZX|1|5|C|4940, 5LZX|1|5|A|4943, 5LZX|1|5|C|4944, 5LZX|1|5|U|4950
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LZX|1|5|C|4749
5LZX|1|5|G|4750
5LZX|1|5|G|4751
5LZX|1|5|U|4752
5LZX|1|5|U|4753
5LZX|1|5|G|4754
*
5LZX|1|5|C|4879
5LZX|1|5|C|4880
5LZX|1|5|U|4881
5LZX|1|5|U|4882
5LZX|1|5|C|4883
*
5LZX|1|5|G|4936
5LZX|1|5|C|4937
5LZX|1|5|A|4938
5LZX|1|5|C|4939
5LZX|1|5|C|4940
5LZX|1|5|G|4941
5LZX|1|5|C|4942
5LZX|1|5|A|4943
5LZX|1|5|C|4944
5LZX|1|5|G|4945
5LZX|1|5|U|4946
5LZX|1|5|U|4947
5LZX|1|5|C|4948
5LZX|1|5|G|4949
5LZX|1|5|U|4950
5LZX|1|5|G|4951
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain M
- eL14
- Chain O
- uL13
- Chain f
- eL33
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