J3_5LZZ_007

3D structure

PDB id

5LZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.47 Å

Loop

Sequence

GAUG*CGCUAAGG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZZ|1|5|G|1969
5LZZ|1|5|A|1970
5LZZ|1|5|U|1971
5LZZ|1|5|G|1972
*
5LZZ|1|5|C|1994
5LZZ|1|5|G|1995
5LZZ|1|5|C|1996
5LZZ|1|5|U|1997
5LZZ|1|5|A|1998
5LZZ|1|5|A|1999
5LZZ|1|5|G|2000
5LZZ|1|5|G|2001
*
5LZZ|1|5|C|2016
5LZZ|1|5|A|2017
5LZZ|1|5|C|2018

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain s

uL10

Chain t

uL11