J3_5MGP_010
3D structure
- PDB id
- 5MGP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 5MGP|1|A|U|2334, 5MGP|1|A|A|2336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MGP|1|A|C|2295
5MGP|1|A|U|2296
5MGP|1|A|A|2297
5MGP|1|A|A|2298
5MGP|1|A|U|2299
*
5MGP|1|A|A|2317
5MGP|1|A|G|2318
5MGP|1|A|G|2319
5MGP|1|A|U|2320
5MGP|1|A|U|2321
5MGP|1|A|A|2322
5MGP|1|A|G|2323
*
5MGP|1|A|C|2332
5MGP|1|A|A|2333
5MGP|1|A|U|2334
5MGP|1|A|A|2335
5MGP|1|A|A|2336
5MGP|1|A|G|2337
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
- Chain x
- Transfer RNA; tRNA
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