J3_5MLC_018

3D structure

PDB id

5MLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGACA*UAUG*CAAG

Length

14 nucleotides

Bulged bases

5MLC|1|A|U|937

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MLC|1|A|U|856
5MLC|1|A|G|857
5MLC|1|A|G|858
5MLC|1|A|A|859
5MLC|1|A|C|860
5MLC|1|A|A|861
*
5MLC|1|A|U|935
5MLC|1|A|A|936
5MLC|1|A|U|937
5MLC|1|A|G|938
*
5MLC|1|A|C|958
5MLC|1|A|A|959
5MLC|1|A|A|960
5MLC|1|A|G|961

Current chains

Chain A

23S ribosomal RNA, chloroplastic

Nearby chains

Chain X

50S ribosomal protein L27, chloroplastic