3D structure

PDB id
5MRC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the yeast mitochondrial ribosome - Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.25 Å

Loop

Sequence
GCAAAGAUAGC*GUAAUAAGAACAAAG*CAAC
Length
30 nucleotides
Bulged bases
5MRC|1|A|U|1633
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5MRC|1|A|G|1626
5MRC|1|A|C|1627
5MRC|1|A|A|1628
5MRC|1|A|A|1629
5MRC|1|A|A|1630
5MRC|1|A|G|1631
5MRC|1|A|A|1632
5MRC|1|A|U|1633
5MRC|1|A|A|1634
5MRC|1|A|G|1635
5MRC|1|A|C|1636
*
5MRC|1|A|G|1658
5MRC|1|A|U|1659
5MRC|1|A|A|1660
5MRC|1|A|A|1661
5MRC|1|A|U|1662
5MRC|1|A|A|1663
5MRC|1|A|A|1664
5MRC|1|A|G|1665
5MRC|1|A|A|1666
5MRC|1|A|A|1667
5MRC|1|A|C|1668
5MRC|1|A|A|1669
5MRC|1|A|A|1670
5MRC|1|A|A|1671
5MRC|1|A|G|1672
*
5MRC|1|A|C|1887
5MRC|1|A|A|1888
5MRC|1|A|A|1889
5MRC|1|A|C|1890

Current chains

Chain A
21S ribosomal RNA

Nearby chains

Chain C
uL3m
Chain I
uL14m
Chain M
bL19m
Chain OO
uS15m
Chain T
uL29m
Chain aa
Small subunit ribosomal RNA; SSU rRNA

Coloring options:

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