J3_5MRE_008

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GCAAAGAUAG*CAAAG*CAAC

Length

19 nucleotides

Bulged bases

5MRE|1|A|U|1633

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|G|1626
5MRE|1|A|C|1627
5MRE|1|A|A|1628
5MRE|1|A|A|1629
5MRE|1|A|A|1630
5MRE|1|A|G|1631
5MRE|1|A|A|1632
5MRE|1|A|U|1633
5MRE|1|A|A|1634
5MRE|1|A|G|1635
*
5MRE|1|A|C|1668
5MRE|1|A|A|1669
5MRE|1|A|A|1670
5MRE|1|A|A|1671
5MRE|1|A|G|1672
*
5MRE|1|A|C|1887
5MRE|1|A|A|1888
5MRE|1|A|A|1889
5MRE|1|A|C|1890

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain C

uL3m

Chain I

uL14m

Chain T

uL29m

Chain aa

Small subunit ribosomal RNA; SSU rRNA