J3_5MRE_010

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UCG*CUAAU*AGACAA

Length

14 nucleotides

Bulged bases

5MRE|1|A|A|2093

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|A|U|1993
5MRE|1|A|C|1994
5MRE|1|A|G|1995
*
5MRE|1|A|C|2091
5MRE|1|A|U|2092
5MRE|1|A|A|2093
5MRE|1|A|A|2094
5MRE|1|A|U|2095
*
5MRE|1|A|A|2249
5MRE|1|A|G|2250
5MRE|1|A|A|2251
5MRE|1|A|C|2252
5MRE|1|A|A|2253
5MRE|1|A|A|2254

Current chains

Chain A

21S ribosomal RNA

Nearby chains

Chain B

uL2m

Chain G

bL9m

Chain S

bL28m