J3_5MRE_017

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

UGAU*AAAU*AAUAAAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|U|412
5MRE|1|aa|G|413
5MRE|1|aa|A|414
5MRE|1|aa|U|415
*
5MRE|1|aa|A|487
5MRE|1|aa|A|488
5MRE|1|aa|A|489
5MRE|1|aa|U|490
*
5MRE|1|aa|A|499
5MRE|1|aa|A|500
5MRE|1|aa|U|501
5MRE|1|aa|A|502
5MRE|1|aa|A|503
5MRE|1|aa|A|504
5MRE|1|aa|A|505

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 66

mS45

Chain DD

uS4m